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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899507.1_cds_XP_016449487.1_44028
CDS Infomation

[gene=LOC107774467] [db_xref=GeneID:107774467] [protein=probable pectinesterase 8 isoform X2] [protein_id=XP_016449487.1] [location=join(42616..42941,43045..43216,43322..43528,44032..44282,46367..46523)] [gbkey=CDS]
Sequence

ATGAATCCTAAAGCCATAGCTTTCCCACTTTTCATAGCAATAACCGCTGTTTTTGTATCA
ACAAATTTCACGTACTTCAACTGCATTCTTAATGTTAATCGACGCCATCACGATCATCGC
CATCATTCTGATGATGATAAGGCAAAAATATCAATATGTGACAAATTTTCACCCAATTTT
CCTACTATAGACACTAATACAACGTCCATTCTATGCGTTGATCATAATGGCTGTTGTAAT
TTCACTACAGTGCAAGCTGCAGTTGATGCAGTTGGGAATTTTAGCGTGAAAAGAAGCTTA
ATATGGATAAGCAATGGCATTTATTTTGAAAAAGTAATTATACCAAAAACAAAACCTAAT
ATCACATTTCAAGGGCAAGGGTATACCACAACAGCTATTGTATGGAATGACACTGCCAAT
TCTGCAAATGGCACATTTTACAGTGGATCTGTCCAAATTTTCTCTACCAACTTCATTGCC
AAGAATATAAGTTTCATGAATGTAGCTCCAATGCCGGGGCCAGGGGCGATAGGAGCGCAA
GCAGTGGCAATAAGGATAGCAGGAGATGAAGCTGCCTTTTGGGGTTGTGGATTTTTTGGA
GCTCAGGATACACTTCATGACGATAGGGGTCGCCATTACTTCAAGGATTGTTATATTCAG
GGTTCCATCGACTTTATTTTTGGCAATGGCAAATCATTGTACGAGTTGATATCAATAGCA
AGCCCAGTAGCAGCAGGAGTTAAGTCGATAAATGGCGCTGTGACAGCACATGGCCGAGCT
ACCAAAGACGAAAACAGCGGCTTTGCATTTGTGAACTGTACTTTGGGAGGGACTGGTAGG
ATTTGGTTGGGGCGTGCATGGAGGCCTTACTCCACTGTCGTCTTTGCTAACACTTACATG
ACTGATATCATCGCTCCTGAGGGCTGGAACGACTTTAACGACCCTTCAAGAGATCAGACA
ATATTTTATGGGGAGTATAATTGTTCAGGAGCAGGATCCAGTATGACATTGAGGGCACCA
TATGTTCAAAGACTAAATGATACACAAGCTCTTCCCTTCCTCAACTCGTCTTTCGTTGAT
GCTAATCAGTGGCTCCAATCTTTTACCTCTTAA

Peptide Sequence

PEP ID

XP_016449487.1
PEP Infomation

PREDICTED: probable pectinesterase 8 isoform X2 [Nicotiana tabacum]
Sequence

MNPKAIAFPLFIAITAVFVSTNFTYFNCILNVNRRHHDHRHHSDDDKAKISICDKFSPNF
PTIDTNTTSILCVDHNGCCNFTTVQAAVDAVGNFSVKRSLIWISNGIYFEKVIIPKTKPN
ITFQGQGYTTTAIVWNDTANSANGTFYSGSVQIFSTNFIAKNISFMNVAPMPGPGAIGAQ
AVAIRIAGDEAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGKSLYELISIA
SPVAAGVKSINGAVTAHGRATKDENSGFAFVNCTLGGTGRIWLGRAWRPYSTVVFANTYM
TDIIAPEGWNDFNDPSRDQTIFYGEYNCSGAGSSMTLRAPYVQRLNDTQALPFLNSSFVD
ANQWLQSFTS

Transcript Sequence

Gene sequence data has not been registered.